Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.72□□□□□ -0.53
Scamp1Q8K021 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.72□□□□□ -0.53
Scamp1Q8K021 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.72□□□□□ -0.53
Scamp1Q8K021 Gm9630-201ENSMUST00000178304 885 ntBASIC11.72□□□□□ -0.53
Scamp1Q8K021 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.72□□□□□ -0.53
Scamp1Q8K021 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.72□□□□□ -0.53
Scamp1Q8K021 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Pck2-205ENSMUST00000226352 2784 ntBASIC11.72□□□□□ -0.53
Scamp1Q8K021 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scamp1Q8K021 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.71□□□□□ -0.53
Scamp1Q8K021 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Gm9211-201ENSMUST00000182882 975 ntBASIC11.71□□□□□ -0.53
Scamp1Q8K021 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.71□□□□□ -0.53
Scamp1Q8K021 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.71□□□□□ -0.53
Scamp1Q8K021 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scamp1Q8K021 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.71□□□□□ -0.54
Scamp1Q8K021 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Scamp1Q8K021 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scamp1Q8K021 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scamp1Q8K021 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scamp1Q8K021 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Scamp1Q8K021 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scamp1Q8K021 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Scamp1Q8K021 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scamp1Q8K021 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Scamp1Q8K021 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scamp1Q8K021 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scamp1Q8K021 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scamp1Q8K021 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scamp1Q8K021 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Scamp1Q8K021 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.7□□□□□ -0.54
Scamp1Q8K021 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.7□□□□□ -0.54
Scamp1Q8K021 Gm5419-201ENSMUST00000119301 527 ntBASIC11.7□□□□□ -0.54
Scamp1Q8K021 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.7□□□□□ -0.54
Scamp1Q8K021 Gm14247-201ENSMUST00000120950 237 ntBASIC11.7□□□□□ -0.54
Scamp1Q8K021 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.7□□□□□ -0.54
Scamp1Q8K021 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.7□□□□□ -0.54
Scamp1Q8K021 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
Scamp1Q8K021 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms