Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.69□□□□□ -0.06
Smc5Q8CG46 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Smc5Q8CG46 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.69□□□□□ -0.06
Smc5Q8CG46 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Gm9230-201ENSMUST00000188228 532 ntBASIC14.69□□□□□ -0.06
Smc5Q8CG46 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.69□□□□□ -0.06
Smc5Q8CG46 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.69□□□□□ -0.06
Smc5Q8CG46 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc5Q8CG46 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Gm11425-201ENSMUST00000119608 498 ntBASIC14.68□□□□□ -0.06
Smc5Q8CG46 Gm11424-201ENSMUST00000121929 829 ntBASIC14.68□□□□□ -0.06
Smc5Q8CG46 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.68□□□□□ -0.06
Smc5Q8CG46 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.68□□□□□ -0.06
Smc5Q8CG46 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Gm9396-201ENSMUST00000076703 567 ntBASIC14.68□□□□□ -0.06
Smc5Q8CG46 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC14.68□□□□□ -0.06
Smc5Q8CG46 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC14.68□□□□□ -0.06
Smc5Q8CG46 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smc5Q8CG46 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smc5Q8CG46 AC154537.1-201ENSMUST00000226101 1304 ntBASIC14.67□□□□□ -0.06
Smc5Q8CG46 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smc5Q8CG46 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Gm38140-201ENSMUST00000193617 2755 ntBASIC14.67□□□□□ -0.06
Smc5Q8CG46 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Gm13829-201ENSMUST00000119600 138 ntBASIC14.67□□□□□ -0.06
Smc5Q8CG46 Gm13297-201ENSMUST00000120205 934 ntBASIC14.67□□□□□ -0.06
Smc5Q8CG46 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.67□□□□□ -0.06
Smc5Q8CG46 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.67□□□□□ -0.06
Smc5Q8CG46 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.67□□□□□ -0.06
Smc5Q8CG46 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms