Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Gm18893-201ENSMUST00000198416 943 ntBASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Gm10312-201ENSMUST00000078515 489 ntBASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc38Q8CDN8 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Gm15547-201ENSMUST00000122152 333 ntBASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Gm10478-201ENSMUST00000084451 396 ntBASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc38Q8CDN8 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Gm38140-201ENSMUST00000193617 2755 ntBASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Gm23270-201ENSMUST00000104055 131 ntBASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Gm9230-201ENSMUST00000188228 532 ntBASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Gm6621-201ENSMUST00000193251 772 ntBASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms