Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Gm7857-201ENSMUST00000117957 358 ntBASIC11.59□□□□□ -0.55
SynpoQ8CC35 Gm12314-201ENSMUST00000118104 538 ntBASIC11.59□□□□□ -0.55
SynpoQ8CC35 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Gm24845-201ENSMUST00000158034 109 ntBASIC11.59□□□□□ -0.55
SynpoQ8CC35 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Gm5070-201ENSMUST00000177599 862 ntBASIC11.59□□□□□ -0.55
SynpoQ8CC35 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Gm39404-201ENSMUST00000216350 313 ntBASIC11.59□□□□□ -0.55
SynpoQ8CC35 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
SynpoQ8CC35 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SynpoQ8CC35 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
SynpoQ8CC35 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.58□□□□□ -0.55
SynpoQ8CC35 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.58□□□□□ -0.56
SynpoQ8CC35 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Gm13996-201ENSMUST00000118456 430 ntBASIC11.58□□□□□ -0.56
SynpoQ8CC35 Gm12217-201ENSMUST00000118858 696 ntBASIC11.58□□□□□ -0.56
SynpoQ8CC35 Gm11597-201ENSMUST00000121423 964 ntBASIC11.58□□□□□ -0.56
SynpoQ8CC35 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Gm32999-201ENSMUST00000192693 562 ntBASIC11.58□□□□□ -0.56
SynpoQ8CC35 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.58□□□□□ -0.56
SynpoQ8CC35 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SynpoQ8CC35 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SynpoQ8CC35 Gm14208-201ENSMUST00000119645 678 ntBASIC11.57□□□□□ -0.56
SynpoQ8CC35 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms