Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Gm42943-201ENSMUST00000199676 3242 ntBASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Gm27552-201ENSMUST00000183351 62 ntBASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Gm27844-201ENSMUST00000183613 62 ntBASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Gm28686-201ENSMUST00000187404 609 ntBASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Gm3332-201ENSMUST00000189337 928 ntBASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Gm38228-201ENSMUST00000193169 1293 ntBASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc60Q8C4J0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Gm43172-201ENSMUST00000202139 2137 ntBASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Gm4310-201ENSMUST00000177847 889 ntBASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 CT025694.1-201ENSMUST00000226188 934 ntBASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc60Q8C4J0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc60Q8C4J0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms