Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tsen54Q8C2A2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tsen54Q8C2A2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10□□□□□ -0.81
Tsen54Q8C2A2 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gm12384-201ENSMUST00000119228 919 ntBASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gm13123-201ENSMUST00000122173 492 ntBASIC10□□□□□ -0.81
Tsen54Q8C2A2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Mir1982-201ENSMUST00000157368 74 ntBASIC10□□□□□ -0.81
Tsen54Q8C2A2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gm9061-201ENSMUST00000182707 1006 ntBASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gm45784-201ENSMUST00000188360 142 ntBASIC10□□□□□ -0.81
Tsen54Q8C2A2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gm8420-201ENSMUST00000097103 598 ntBASIC10□□□□□ -0.81
Tsen54Q8C2A2 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gm45428-201ENSMUST00000209619 1789 ntBASIC10□□□□□ -0.81
Tsen54Q8C2A2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Tsen54Q8C2A2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10□□□□□ -0.81
Tsen54Q8C2A2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10□□□□□ -0.81
Tsen54Q8C2A2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Gm13226-201ENSMUST00000117838 404 ntBASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Gm8805-201ENSMUST00000117848 313 ntBASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Gm27731-201ENSMUST00000185192 107 ntBASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Gm40466-201ENSMUST00000212174 422 ntBASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms