Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Gm13888-201ENSMUST00000119148 422 ntBASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Gm8285-201ENSMUST00000208293 759 ntBASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.47
Sh3rf2Q8BZT2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.08□□□□□ -0.47
Sh3rf2Q8BZT2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Mir7032-201ENSMUST00000185154 79 ntBASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Gm44545-201ENSMUST00000208262 746 ntBASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Gm45398-201ENSMUST00000210561 165 ntBASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh3rf2Q8BZT2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm14193-201ENSMUST00000105067 153 ntBASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm14460-201ENSMUST00000121511 639 ntBASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm14665-201ENSMUST00000122294 557 ntBASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms