Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Gm15276-201ENSMUST00000145953 498 ntBASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Gm35960-201ENSMUST00000202712 767 ntBASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Gm45224-201ENSMUST00000208203 414 ntBASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cpsf4Q8BQZ5 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Gm25700-201ENSMUST00000177693 110 ntBASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Gm45186-201ENSMUST00000206874 478 ntBASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Gzmn-202ENSMUST00000225535 989 ntBASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Gm10312-201ENSMUST00000078515 489 ntBASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4Q8BQZ5 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4Q8BQZ5 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms