Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm14247-201ENSMUST00000120950 237 ntBASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm11660-201ENSMUST00000120955 412 ntBASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm13263-201ENSMUST00000121271 838 ntBASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm12164-201ENSMUST00000121695 551 ntBASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm9132-201ENSMUST00000210182 832 ntBASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp1Q8BJQ2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Gm28686-201ENSMUST00000187404 609 ntBASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Usp1Q8BJQ2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.71□□□□□ -0.38
Usp1Q8BJQ2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.71□□□□□ -0.38
Usp1Q8BJQ2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp1Q8BJQ2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp1Q8BJQ2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp1Q8BJQ2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp1Q8BJQ2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp1Q8BJQ2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp1Q8BJQ2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp1Q8BJQ2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp1Q8BJQ2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp1Q8BJQ2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp1Q8BJQ2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms