Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm45784-201ENSMUST00000188360 142 ntBASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm42693-201ENSMUST00000196779 631 ntBASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Rprl1-201ENSMUST00000158050 327 ntBASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Gm28882-201ENSMUST00000185504 314 ntBASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Gm37008-201ENSMUST00000195712 319 ntBASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp2bQ8BJF9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Gm22018-201ENSMUST00000104357 131 ntBASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Gm18711-201ENSMUST00000199341 750 ntBASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Gm17931-201ENSMUST00000208132 634 ntBASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.21□□□□□ -0.45
Chmp2bQ8BJF9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms