Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.46□□□□□ -0.57
SynbQ8BI41 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SynbQ8BI41 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.46□□□□□ -0.57
SynbQ8BI41 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SynbQ8BI41 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SynbQ8BI41 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.46□□□□□ -0.57
SynbQ8BI41 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.46□□□□□ -0.57
SynbQ8BI41 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 Gm15131-201ENSMUST00000119124 595 ntBASIC11.46□□□□□ -0.57
SynbQ8BI41 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.46□□□□□ -0.57
SynbQ8BI41 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.46□□□□□ -0.57
SynbQ8BI41 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.46□□□□□ -0.57
SynbQ8BI41 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.46□□□□□ -0.57
SynbQ8BI41 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.46□□□□□ -0.57
SynbQ8BI41 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SynbQ8BI41 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SynbQ8BI41 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SynbQ8BI41 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
SynbQ8BI41 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.58
SynbQ8BI41 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
SynbQ8BI41 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SynbQ8BI41 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
SynbQ8BI41 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SynbQ8BI41 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.45□□□□□ -0.58
SynbQ8BI41 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
SynbQ8BI41 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.45□□□□□ -0.58
SynbQ8BI41 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Gm15703-201ENSMUST00000120250 880 ntBASIC11.45□□□□□ -0.58
SynbQ8BI41 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.45□□□□□ -0.58
SynbQ8BI41 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Gm44545-201ENSMUST00000208262 746 ntBASIC11.45□□□□□ -0.58
SynbQ8BI41 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.45□□□□□ -0.58
SynbQ8BI41 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Ntng1-201ENSMUST00000051253 327 ntBASIC11.45□□□□□ -0.58
SynbQ8BI41 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SynbQ8BI41 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.45□□□□□ -0.58
SynbQ8BI41 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.45□□□□□ -0.58
SynbQ8BI41 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.45□□□□□ -0.58
SynbQ8BI41 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.45□□□□□ -0.58
SynbQ8BI41 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.45□□□□□ -0.58
SynbQ8BI41 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SynbQ8BI41 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
SynbQ8BI41 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.45□□□□□ -0.58
SynbQ8BI41 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SynbQ8BI41 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynbQ8BI41 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
SynbQ8BI41 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynbQ8BI41 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms