Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm7504-201ENSMUST00000201449 424 ntBASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 AC158388.3-202ENSMUST00000225517 775 ntBASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Ttc28Q80XJ3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Gm12337-201ENSMUST00000119634 400 ntBASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Gm11942-201ENSMUST00000180255 345 ntBASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Gm14807-201ENSMUST00000116640 983 ntBASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Gm24809-201ENSMUST00000175318 271 ntBASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ttc28Q80XJ3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Gm43334-201ENSMUST00000197740 1318 ntBASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Gm4930-201ENSMUST00000219926 1087 ntBASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.97□□□□□ -0.81
Ttc28Q80XJ3 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms