Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim62Q80V85 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim62Q80V85 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim62Q80V85 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.43
Trim62Q80V85 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trim62Q80V85 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim62Q80V85 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trim62Q80V85 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Trim62Q80V85 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Trim62Q80V85 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trim62Q80V85 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim62Q80V85 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Trim62Q80V85 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim62Q80V85 Gm12217-201ENSMUST00000118858 696 ntBASIC12.33□□□□□ -0.44
Trim62Q80V85 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.33□□□□□ -0.44
Trim62Q80V85 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim62Q80V85 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.33□□□□□ -0.44
Trim62Q80V85 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim62Q80V85 Gm16505-201ENSMUST00000179981 232 ntBASIC12.33□□□□□ -0.44
Trim62Q80V85 Gm27552-201ENSMUST00000183351 62 ntBASIC12.33□□□□□ -0.44
Trim62Q80V85 Gm27844-201ENSMUST00000183613 62 ntBASIC12.33□□□□□ -0.44
Trim62Q80V85 Gm38117-201ENSMUST00000194653 939 ntBASIC12.33□□□□□ -0.44
Trim62Q80V85 Gm6450-201ENSMUST00000200896 574 ntBASIC12.33□□□□□ -0.44
Trim62Q80V85 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim62Q80V85 Gm10288-201ENSMUST00000084614 537 ntBASIC12.33□□□□□ -0.44
Trim62Q80V85 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.33□□□□□ -0.44
Trim62Q80V85 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim62Q80V85 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim62Q80V85 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.33□□□□□ -0.44
Trim62Q80V85 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim62Q80V85 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim62Q80V85 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim62Q80V85 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim62Q80V85 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim62Q80V85 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim62Q80V85 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Trim62Q80V85 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.32□□□□□ -0.44
Trim62Q80V85 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim62Q80V85 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim62Q80V85 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim62Q80V85 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim62Q80V85 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim62Q80V85 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim62Q80V85 Gm28686-201ENSMUST00000187404 609 ntBASIC12.32□□□□□ -0.44
Trim62Q80V85 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.32□□□□□ -0.44
Trim62Q80V85 Gm9136-201ENSMUST00000193368 454 ntBASIC12.32□□□□□ -0.44
Trim62Q80V85 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.32□□□□□ -0.44
Trim62Q80V85 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim62Q80V85 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.32□□□□□ -0.44
Trim62Q80V85 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim62Q80V85 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.32□□□□□ -0.44
Trim62Q80V85 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim62Q80V85 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim62Q80V85 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim62Q80V85 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms