Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gm14832-201ENSMUST00000121289 322 ntBASIC11.35□□□□□ -0.59
Otub1Q7TQI3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gm27501-201ENSMUST00000183599 107 ntBASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gm42693-201ENSMUST00000196779 631 ntBASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gm42627-201ENSMUST00000197347 224 ntBASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gm6013-201ENSMUST00000212264 699 ntBASIC11.35□□□□□ -0.59
Otub1Q7TQI3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.35□□□□□ -0.59
Otub1Q7TQI3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Gm2991-201ENSMUST00000173338 480 ntBASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otub1Q7TQI3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Gm13297-201ENSMUST00000120205 934 ntBASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Gm7399-201ENSMUST00000032395 858 ntBASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms