Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx55Q6ZPL9 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Gm26047-201ENSMUST00000157308 113 ntBASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Gm26989-201ENSMUST00000182608 749 ntBASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Mir6923-201ENSMUST00000184592 72 ntBASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Gm5982-201ENSMUST00000196234 512 ntBASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Gm26047-202ENSMUST00000198840 115 ntBASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Gm7902-201ENSMUST00000198842 947 ntBASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Gm18968-201ENSMUST00000221319 862 ntBASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ddx55Q6ZPL9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx55Q6ZPL9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx55Q6ZPL9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx55Q6ZPL9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ddx55Q6ZPL9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx55Q6ZPL9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx55Q6ZPL9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.24
Ddx55Q6ZPL9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx55Q6ZPL9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Ddx55Q6ZPL9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
Ddx55Q6ZPL9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Gm14270-201ENSMUST00000118388 846 ntBASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Gm11354-201ENSMUST00000121974 422 ntBASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Gm24248-201ENSMUST00000157321 322 ntBASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Mir8093-201ENSMUST00000185043 137 ntBASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Gm19587-201ENSMUST00000191395 545 ntBASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Gm43778-201ENSMUST00000199438 199 ntBASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Gm44552-201ENSMUST00000205458 1247 ntBASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx55Q6ZPL9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx55Q6ZPL9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx55Q6ZPL9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ddx55Q6ZPL9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx55Q6ZPL9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx55Q6ZPL9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ddx55Q6ZPL9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx55Q6ZPL9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx55Q6ZPL9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx55Q6ZPL9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx55Q6ZPL9 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms