Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Gm8598-201ENSMUST00000221184 836 ntBASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf220Q6PDX6 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Gm28911-201ENSMUST00000188837 117 ntBASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Gm18018-201ENSMUST00000198273 408 ntBASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Gm38671-201ENSMUST00000200573 130 ntBASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf220Q6PDX6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Gm10156-201ENSMUST00000122364 462 ntBASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms