Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Gm19046-201ENSMUST00000221263 1298 ntBASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gm22442-201ENSMUST00000157256 144 ntBASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gm24248-201ENSMUST00000157321 322 ntBASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gm22379-201ENSMUST00000157480 131 ntBASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gm7082-201ENSMUST00000209880 969 ntBASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gm4604-201ENSMUST00000025040 390 ntBASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gm10254-201ENSMUST00000052888 867 ntBASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Gm18798-201ENSMUST00000187264 1700 ntBASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd4Q6PDQ2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 Gm15003-201ENSMUST00000118884 446 ntBASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 Gm16030-201ENSMUST00000159098 603 ntBASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 Gm43671-201ENSMUST00000200422 433 ntBASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 Gm40879-201ENSMUST00000220759 612 ntBASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd4Q6PDQ2 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Gm11500-201ENSMUST00000118237 601 ntBASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Gm7541-201ENSMUST00000118361 535 ntBASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Gm4895-201ENSMUST00000181646 1137 ntBASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Gm6390-201ENSMUST00000215034 589 ntBASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Gm5171-201ENSMUST00000214944 1415 ntBASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd4Q6PDQ2 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Gm25562-201ENSMUST00000104608 133 ntBASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Gm13351-201ENSMUST00000118087 414 ntBASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Gm28833-201ENSMUST00000189671 559 ntBASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd4Q6PDQ2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms