Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Gm18056-201ENSMUST00000207670 568 ntBASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Gm18061-201ENSMUST00000208350 562 ntBASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Gm18063-201ENSMUST00000208529 568 ntBASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Gm18052-201ENSMUST00000208750 559 ntBASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Casc4Q6P2L7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Gm2383-201ENSMUST00000181461 807 ntBASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Gm17812-201ENSMUST00000204935 318 ntBASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.1□□□□□ -0.47
Casc4Q6P2L7 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.1□□□□□ -0.47
Casc4Q6P2L7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Casc4Q6P2L7 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Gm8913-201ENSMUST00000209491 641 ntBASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Gm18212-201ENSMUST00000211678 889 ntBASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms