Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
VcanQ62059 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Gm4705-201ENSMUST00000177415 354 ntBASIC10.87□□□□□ -0.67
VcanQ62059 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.87□□□□□ -0.67
VcanQ62059 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.87□□□□□ -0.67
VcanQ62059 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
VcanQ62059 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.86□□□□□ -0.67
VcanQ62059 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
VcanQ62059 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
VcanQ62059 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Gm15374-201ENSMUST00000119313 844 ntBASIC10.86□□□□□ -0.67
VcanQ62059 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
VcanQ62059 Mir1249-201ENSMUST00000116791 98 ntBASIC10.86□□□□□ -0.67
VcanQ62059 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
VcanQ62059 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.86□□□□□ -0.67
VcanQ62059 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC10.86□□□□□ -0.67
VcanQ62059 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
VcanQ62059 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.86□□□□□ -0.67
VcanQ62059 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.86□□□□□ -0.67
VcanQ62059 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VcanQ62059 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
VcanQ62059 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
VcanQ62059 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
VcanQ62059 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
VcanQ62059 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
VcanQ62059 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.85□□□□□ -0.67
VcanQ62059 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
VcanQ62059 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.85□□□□□ -0.67
VcanQ62059 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC10.85□□□□□ -0.67
VcanQ62059 Capsl-202ENSMUST00000226688 739 ntBASIC10.85□□□□□ -0.67
VcanQ62059 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.85□□□□□ -0.67
VcanQ62059 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.85□□□□□ -0.67
VcanQ62059 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
VcanQ62059 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
VcanQ62059 Gm12912-201ENSMUST00000121596 1381 ntBASIC10.85□□□□□ -0.67
VcanQ62059 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.85□□□□□ -0.67
VcanQ62059 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
VcanQ62059 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.85□□□□□ -0.67
VcanQ62059 Gm20091-201ENSMUST00000179683 189 ntBASIC10.85□□□□□ -0.67
VcanQ62059 Gm42908-201ENSMUST00000197508 870 ntBASIC10.85□□□□□ -0.67
VcanQ62059 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.85□□□□□ -0.67
VcanQ62059 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
VcanQ62059 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VcanQ62059 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VcanQ62059 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms