Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Sox17Q61473 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox17Q61473 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox17Q61473 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sox17Q61473 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Sox17Q61473 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.63
Sox17Q61473 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Sox17Q61473 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.14□□□□□ -0.63
Sox17Q61473 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sox17Q61473 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Sox17Q61473 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox17Q61473 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Gm5904-201ENSMUST00000210286 865 ntBASIC11.14□□□□□ -0.63
Sox17Q61473 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.14□□□□□ -0.63
Sox17Q61473 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.14□□□□□ -0.63
Sox17Q61473 Gm45930-201ENSMUST00000221330 292 ntBASIC11.14□□□□□ -0.63
Sox17Q61473 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sox17Q61473 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.14□□□□□ -0.63
Sox17Q61473 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Sox17Q61473 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox17Q61473 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sox17Q61473 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Sox17Q61473 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sox17Q61473 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.14□□□□□ -0.63
Sox17Q61473 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox17Q61473 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sox17Q61473 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox17Q61473 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sox17Q61473 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.13□□□□□ -0.63
Sox17Q61473 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sox17Q61473 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.13□□□□□ -0.63
Sox17Q61473 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Gm24934-201ENSMUST00000103764 111 ntBASIC11.13□□□□□ -0.63
Sox17Q61473 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sox17Q61473 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.13□□□□□ -0.63
Sox17Q61473 Mir1894-201ENSMUST00000122802 81 ntBASIC11.13□□□□□ -0.63
Sox17Q61473 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.13□□□□□ -0.63
Sox17Q61473 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Gm6222-202ENSMUST00000182143 629 ntBASIC11.13□□□□□ -0.63
Sox17Q61473 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Gm10268-201ENSMUST00000085340 555 ntBASIC11.13□□□□□ -0.63
Sox17Q61473 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox17Q61473 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms