Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm37246-201ENSMUST00000192665 835 ntBASIC12.41□□□□□ -0.42
Smarcd1Q61466 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.41□□□□□ -0.42
Smarcd1Q61466 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Gm9555-201ENSMUST00000200908 583 ntBASIC12.41□□□□□ -0.42
Smarcd1Q61466 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smarcd1Q61466 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.41□□□□□ -0.42
Smarcd1Q61466 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.41□□□□□ -0.42
Smarcd1Q61466 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.41□□□□□ -0.42
Smarcd1Q61466 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smarcd1Q61466 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.4□□□□□ -0.42
Smarcd1Q61466 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Gm12165-201ENSMUST00000117047 342 ntBASIC12.4□□□□□ -0.42
Smarcd1Q61466 Gm13809-201ENSMUST00000117921 597 ntBASIC12.4□□□□□ -0.42
Smarcd1Q61466 Gm13045-201ENSMUST00000119019 712 ntBASIC12.4□□□□□ -0.42
Smarcd1Q61466 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.4□□□□□ -0.42
Smarcd1Q61466 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Gm6450-201ENSMUST00000200896 574 ntBASIC12.4□□□□□ -0.42
Smarcd1Q61466 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Smarcd1Q61466 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.4□□□□□ -0.42
Smarcd1Q61466 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd1Q61466 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.4□□□□□ -0.43
Smarcd1Q61466 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smarcd1Q61466 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Smarcd1Q61466 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.43
Smarcd1Q61466 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smarcd1Q61466 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Smarcd1Q61466 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.39□□□□□ -0.43
Smarcd1Q61466 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Gm20426-201ENSMUST00000173657 440 ntBASIC12.39□□□□□ -0.43
Smarcd1Q61466 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Ginm1-202ENSMUST00000065124 300 ntBASIC12.39□□□□□ -0.43
Smarcd1Q61466 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smarcd1Q61466 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms