Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.17□□□□□ -0.3
Ift88Q61371 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ift88Q61371 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ift88Q61371 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ift88Q61371 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ift88Q61371 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ift88Q61371 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ift88Q61371 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.17□□□□□ -0.3
Ift88Q61371 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ift88Q61371 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ift88Q61371 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.16□□□□□ -0.3
Ift88Q61371 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Gm7722-201ENSMUST00000120646 741 ntBASIC13.16□□□□□ -0.3
Ift88Q61371 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.16□□□□□ -0.3
Ift88Q61371 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.16□□□□□ -0.3
Ift88Q61371 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.16□□□□□ -0.3
Ift88Q61371 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.16□□□□□ -0.3
Ift88Q61371 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.16□□□□□ -0.3
Ift88Q61371 Gm43133-201ENSMUST00000197472 463 ntBASIC13.16□□□□□ -0.3
Ift88Q61371 Gm43118-201ENSMUST00000199149 775 ntBASIC13.16□□□□□ -0.3
Ift88Q61371 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ift88Q61371 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ift88Q61371 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.16□□□□□ -0.3
Ift88Q61371 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.16□□□□□ -0.3
Ift88Q61371 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ift88Q61371 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.16□□□□□ -0.3
Ift88Q61371 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.16□□□□□ -0.3
Ift88Q61371 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.16□□□□□ -0.3
Ift88Q61371 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ift88Q61371 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.15□□□□□ -0.3
Ift88Q61371 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ift88Q61371 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.15□□□□□ -0.3
Ift88Q61371 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Gm23931-201ENSMUST00000103842 109 ntBASIC13.15□□□□□ -0.3
Ift88Q61371 Gm11531-201ENSMUST00000117614 555 ntBASIC13.15□□□□□ -0.3
Ift88Q61371 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.15□□□□□ -0.3
Ift88Q61371 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.15□□□□□ -0.3
Ift88Q61371 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Ift88Q61371 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.15□□□□□ -0.3
Ift88Q61371 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.15□□□□□ -0.3
Ift88Q61371 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.15□□□□□ -0.3
Ift88Q61371 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.15□□□□□ -0.3
Ift88Q61371 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ift88Q61371 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Ift88Q61371 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.15□□□□□ -0.3
Ift88Q61371 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ift88Q61371 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ift88Q61371 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ift88Q61371 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ift88Q61371 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ift88Q61371 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.14□□□□□ -0.31
Ift88Q61371 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ift88Q61371 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ift88Q61371 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.14□□□□□ -0.31
Ift88Q61371 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Ift88Q61371 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ift88Q61371 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ift88Q61371 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ift88Q61371 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ift88Q61371 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ift88Q61371 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ift88Q61371 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.14□□□□□ -0.31
Ift88Q61371 Gm18893-201ENSMUST00000198416 943 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms