Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm8815-201ENSMUST00000173809 620 ntBASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm15004-201ENSMUST00000119192 630 ntBASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm12948-201ENSMUST00000119406 682 ntBASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ccdc88aQ5SNZ0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm14585-201ENSMUST00000120713 634 ntBASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm4604-201ENSMUST00000025040 390 ntBASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Matn2-203ENSMUST00000226766 3252 ntBASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms