Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Gm12164-201ENSMUST00000121695 551 ntBASIC11.79□□□□□ -0.52
Scn2bQ56A07 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Gm18711-201ENSMUST00000199341 750 ntBASIC11.79□□□□□ -0.52
Scn2bQ56A07 Gm30285-201ENSMUST00000214614 422 ntBASIC11.79□□□□□ -0.52
Scn2bQ56A07 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Scn2bQ56A07 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.79□□□□□ -0.52
Scn2bQ56A07 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn2bQ56A07 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.78□□□□□ -0.52
Scn2bQ56A07 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.78□□□□□ -0.52
Scn2bQ56A07 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.78□□□□□ -0.52
Scn2bQ56A07 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gm31256-201ENSMUST00000194705 506 ntBASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gm7783-201ENSMUST00000204795 781 ntBASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gm21769-201ENSMUST00000211922 111 ntBASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gm5950-201ENSMUST00000213337 772 ntBASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gm19994-201ENSMUST00000217086 586 ntBASIC11.78□□□□□ -0.52
Scn2bQ56A07 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.78□□□□□ -0.52
Scn2bQ56A07 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.78□□□□□ -0.52
Scn2bQ56A07 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Scn2bQ56A07 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.77□□□□□ -0.52
Scn2bQ56A07 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.77□□□□□ -0.52
Scn2bQ56A07 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scn2bQ56A07 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Scn2bQ56A07 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scn2bQ56A07 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scn2bQ56A07 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Scn2bQ56A07 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Gm11531-201ENSMUST00000117614 555 ntBASIC11.77□□□□□ -0.53
Scn2bQ56A07 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.77□□□□□ -0.53
Scn2bQ56A07 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.77□□□□□ -0.53
Scn2bQ56A07 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Scn2bQ56A07 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms