Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm8731-201ENSMUST00000118088 412 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm11956-201ENSMUST00000119525 512 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm15566-201ENSMUST00000121130 590 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm13899-201ENSMUST00000121519 1255 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm22144-201ENSMUST00000157402 102 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm8815-201ENSMUST00000173809 620 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm29787-201ENSMUST00000222129 849 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rc3h1Q4VGL6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Gm13916-201ENSMUST00000117368 628 ntBASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Gm19459-201ENSMUST00000176240 835 ntBASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Gm7467-201ENSMUST00000185173 652 ntBASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Gm5244-202ENSMUST00000189517 743 ntBASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Gm5051-201ENSMUST00000204085 485 ntBASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rc3h1Q4VGL6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gm4726-201ENSMUST00000135604 736 ntBASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rc3h1Q4VGL6 Gm6019-201ENSMUST00000148369 736 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms