Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim40Q3UWA4 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Gm24196-201ENSMUST00000179161 110 ntBASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Gm8652-201ENSMUST00000181363 964 ntBASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim40Q3UWA4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Gm12363-201ENSMUST00000122250 668 ntBASIC11.16□□□□□ -0.62
Trim40Q3UWA4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Gm29705-201ENSMUST00000212598 474 ntBASIC11.16□□□□□ -0.62
Trim40Q3UWA4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim40Q3UWA4 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms