Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cops9Q3U898 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cops9Q3U898 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cops9Q3U898 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cops9Q3U898 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cops9Q3U898 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cops9Q3U898 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Cops9Q3U898 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cops9Q3U898 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC8.14□□□□□ -1.11
Cops9Q3U898 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC8.14□□□□□ -1.11
Cops9Q3U898 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cops9Q3U898 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC8.14□□□□□ -1.11
Cops9Q3U898 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cops9Q3U898 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cops9Q3U898 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Cops9Q3U898 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cops9Q3U898 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cops9Q3U898 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Gm36940-201ENSMUST00000194281 2036 ntBASIC8.13□□□□□ -1.11
Cops9Q3U898 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Gm43375-201ENSMUST00000196705 2480 ntBASIC8.13□□□□□ -1.11
Cops9Q3U898 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 AC093022.4-203ENSMUST00000228523 2657 ntBASIC8.13□□□□□ -1.11
Cops9Q3U898 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Gm21362-201ENSMUST00000194272 928 ntBASIC8.13□□□□□ -1.11
Cops9Q3U898 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Ift172-201ENSMUST00000041565 5403 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Gm5766-201ENSMUST00000160520 1977 ntBASIC8.13□□□□□ -1.11
Cops9Q3U898 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Gm38089-201ENSMUST00000193585 1514 ntBASIC8.13□□□□□ -1.11
Cops9Q3U898 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cops9Q3U898 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cops9Q3U898 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Cops9Q3U898 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cops9Q3U898 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cops9Q3U898 Gm44415-201ENSMUST00000204151 2112 ntBASIC8.12□□□□□ -1.11
Cops9Q3U898 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cops9Q3U898 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cops9Q3U898 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cops9Q3U898 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cops9Q3U898 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms