Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Gm43433-201ENSMUST00000196573 481 ntBASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Gm42612-201ENSMUST00000197986 623 ntBASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Gm43170-201ENSMUST00000199827 612 ntBASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Gm42790-201ENSMUST00000201268 969 ntBASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Gm9908-201ENSMUST00000211534 448 ntBASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Gm15703-201ENSMUST00000120250 880 ntBASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Gm24694-201ENSMUST00000180054 110 ntBASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Gm27663-201ENSMUST00000184839 110 ntBASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Gm4034-201ENSMUST00000187674 480 ntBASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Gm45384-201ENSMUST00000210451 277 ntBASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccbe1Q3MI99 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccbe1Q3MI99 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms