Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.46□□□□□ -0.57
Hoxc4Q08624 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc4Q08624 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm8459-201ENSMUST00000162504 760 ntBASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm4654-201ENSMUST00000183305 982 ntBASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.46□□□□□ -0.57
Hoxc4Q08624 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.46□□□□□ -0.57
Hoxc4Q08624 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.46□□□□□ -0.57
Hoxc4Q08624 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.46□□□□□ -0.57
Hoxc4Q08624 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc4Q08624 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.46□□□□□ -0.57
Hoxc4Q08624 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.46□□□□□ -0.58
Hoxc4Q08624 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxc4Q08624 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxc4Q08624 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Hoxc4Q08624 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxc4Q08624 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxc4Q08624 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxc4Q08624 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxc4Q08624 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxc4Q08624 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.46□□□□□ -0.58
Hoxc4Q08624 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxc4Q08624 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Gm12029-201ENSMUST00000120073 832 ntBASIC11.45□□□□□ -0.58
Hoxc4Q08624 Gm11836-201ENSMUST00000121022 441 ntBASIC11.45□□□□□ -0.58
Hoxc4Q08624 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Gm14460-201ENSMUST00000121511 639 ntBASIC11.45□□□□□ -0.58
Hoxc4Q08624 Gm7150-201ENSMUST00000122032 981 ntBASIC11.45□□□□□ -0.58
Hoxc4Q08624 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.45□□□□□ -0.58
Hoxc4Q08624 Mir8115-201ENSMUST00000184992 119 ntBASIC11.45□□□□□ -0.58
Hoxc4Q08624 Gm43186-201ENSMUST00000198130 824 ntBASIC11.45□□□□□ -0.58
Hoxc4Q08624 Gm35960-201ENSMUST00000202712 767 ntBASIC11.45□□□□□ -0.58
Hoxc4Q08624 Gm2517-201ENSMUST00000215651 348 ntBASIC11.45□□□□□ -0.58
Hoxc4Q08624 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxc4Q08624 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.45□□□□□ -0.58
Hoxc4Q08624 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.45□□□□□ -0.58
Hoxc4Q08624 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hoxc4Q08624 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.45□□□□□ -0.58
Hoxc4Q08624 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Hoxc4Q08624 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxc4Q08624 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.44□□□□□ -0.58
Hoxc4Q08624 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.44□□□□□ -0.58
Hoxc4Q08624 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.44□□□□□ -0.58
Hoxc4Q08624 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc4Q08624 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.44□□□□□ -0.58
Hoxc4Q08624 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms