Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 Gm8805-201ENSMUST00000117848 313 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Gm14704-201ENSMUST00000120300 874 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 Gm27701-201ENSMUST00000184498 110 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 Gm8515-201ENSMUST00000194852 576 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Gm6745-201ENSMUST00000199216 526 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 Gm9908-201ENSMUST00000211534 448 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Scn1bP97952 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Scn1bP97952 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.88□□□□□ -0.67
Scn1bP97952 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scn1bP97952 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Scn1bP97952 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Scn1bP97952 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.87□□□□□ -0.67
Scn1bP97952 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Scn1bP97952 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Scn1bP97952 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Scn1bP97952 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Scn1bP97952 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.87□□□□□ -0.67
Scn1bP97952 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.87□□□□□ -0.67
Scn1bP97952 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.87□□□□□ -0.67
Scn1bP97952 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Rmrp-201ENSMUST00000157463 271 ntBASIC10.87□□□□□ -0.67
Scn1bP97952 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Scn1bP97952 Gm2495-201ENSMUST00000191160 466 ntBASIC10.87□□□□□ -0.67
Scn1bP97952 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.87□□□□□ -0.67
Scn1bP97952 Gm8099-201ENSMUST00000200510 742 ntBASIC10.87□□□□□ -0.67
Scn1bP97952 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Scn1bP97952 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.87□□□□□ -0.67
Scn1bP97952 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Scn1bP97952 Gm6180-201ENSMUST00000065243 498 ntBASIC10.87□□□□□ -0.67
Scn1bP97952 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.87□□□□□ -0.67
Scn1bP97952 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.87□□□□□ -0.67
Scn1bP97952 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.87□□□□□ -0.67
Scn1bP97952 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Scn1bP97952 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Scn1bP97952 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scn1bP97952 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.87□□□□□ -0.67
Scn1bP97952 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.86□□□□□ -0.67
Scn1bP97952 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scn1bP97952 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms