Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.92□□□□□ -0.02
Smarcc1P97496 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.91□□□□□ -0.02
Smarcc1P97496 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Smarcc1P97496 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Smarcc1P97496 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.91□□□□□ -0.02
Smarcc1P97496 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Smarcc1P97496 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Smarcc1P97496 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.91□□□□□ -0.02
Smarcc1P97496 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.91□□□□□ -0.02
Smarcc1P97496 Gm14807-201ENSMUST00000116640 983 ntBASIC14.91□□□□□ -0.02
Smarcc1P97496 Gm13117-201ENSMUST00000120894 691 ntBASIC14.91□□□□□ -0.02
Smarcc1P97496 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.91□□□□□ -0.02
Smarcc1P97496 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC14.91□□□□□ -0.02
Smarcc1P97496 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.91□□□□□ -0.02
Smarcc1P97496 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Gm23105-201ENSMUST00000083719 134 ntBASIC14.91□□□□□ -0.02
Smarcc1P97496 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.91□□□□□ -0.02
Smarcc1P97496 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Smarcc1P97496 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.91□□□□□ -0.02
Smarcc1P97496 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.91□□□□□ -0.02
Smarcc1P97496 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcc1P97496 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Gm15615-201ENSMUST00000118876 198 ntBASIC14.9□□□□□ -0.02
Smarcc1P97496 Gm12783-201ENSMUST00000121425 397 ntBASIC14.9□□□□□ -0.02
Smarcc1P97496 Gm25545-201ENSMUST00000122673 323 ntBASIC14.9□□□□□ -0.02
Smarcc1P97496 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Gm8459-201ENSMUST00000162504 760 ntBASIC14.9□□□□□ -0.02
Smarcc1P97496 Mir6923-201ENSMUST00000184592 72 ntBASIC14.9□□□□□ -0.02
Smarcc1P97496 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.9□□□□□ -0.02
Smarcc1P97496 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcc1P97496 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smarcc1P97496 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc1P97496 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms