Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cacna1aP97445 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cacna1aP97445 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cacna1aP97445 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cacna1aP97445 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cacna1aP97445 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cacna1aP97445 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Cacna1aP97445 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cacna1aP97445 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cacna1aP97445 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cacna1aP97445 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cacna1aP97445 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cacna1aP97445 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm23255-201ENSMUST00000102244 110 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Defa-ps17-201ENSMUST00000121849 171 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm3329-201ENSMUST00000159873 556 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm29763-201ENSMUST00000205306 616 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm25076-201ENSMUST00000104098 132 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.03□□□□□ -0.64
Cacna1aP97445 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm45481-201ENSMUST00000209717 877 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm26035-201ENSMUST00000083065 308 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cacna1aP97445 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.03□□□□□ -0.64
Cacna1aP97445 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cacna1aP97445 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cacna1aP97445 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cacna1aP97445 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cacna1aP97445 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cacna1aP97445 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.02□□□□□ -0.64
Cacna1aP97445 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cacna1aP97445 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Cacna1aP97445 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cacna1aP97445 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cacna1aP97445 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cacna1aP97445 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cacna1aP97445 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.02□□□□□ -0.65
Cacna1aP97445 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.02□□□□□ -0.65
Cacna1aP97445 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.02□□□□□ -0.65
Cacna1aP97445 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.02□□□□□ -0.65
Cacna1aP97445 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.02□□□□□ -0.65
Cacna1aP97445 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cacna1aP97445 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.02□□□□□ -0.65
Cacna1aP97445 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms