Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Lig3P97386 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Lig3P97386 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.11□□□□□ -0.31
Lig3P97386 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.11□□□□□ -0.31
Lig3P97386 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lig3P97386 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.1□□□□□ -0.31
Lig3P97386 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.1□□□□□ -0.31
Lig3P97386 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Lig3P97386 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.1□□□□□ -0.31
Lig3P97386 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.1□□□□□ -0.31
Lig3P97386 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.1□□□□□ -0.31
Lig3P97386 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.1□□□□□ -0.31
Lig3P97386 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.1□□□□□ -0.31
Lig3P97386 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.1□□□□□ -0.31
Lig3P97386 Gm13045-201ENSMUST00000119019 712 ntBASIC13.1□□□□□ -0.31
Lig3P97386 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lig3P97386 Gm6963-201ENSMUST00000147879 379 ntBASIC13.1□□□□□ -0.31
Lig3P97386 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Gm19353-201ENSMUST00000184561 445 ntBASIC13.1□□□□□ -0.31
Lig3P97386 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.1□□□□□ -0.31
Lig3P97386 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.1□□□□□ -0.31
Lig3P97386 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.1□□□□□ -0.31
Lig3P97386 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.1□□□□□ -0.31
Lig3P97386 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.1□□□□□ -0.31
Lig3P97386 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.1□□□□□ -0.31
Lig3P97386 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lig3P97386 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.09□□□□□ -0.31
Lig3P97386 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lig3P97386 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lig3P97386 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Lig3P97386 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lig3P97386 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.09□□□□□ -0.31
Lig3P97386 Gm13736-201ENSMUST00000119272 253 ntBASIC13.09□□□□□ -0.31
Lig3P97386 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.09□□□□□ -0.31
Lig3P97386 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lig3P97386 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.09□□□□□ -0.31
Lig3P97386 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.09□□□□□ -0.31
Lig3P97386 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.09□□□□□ -0.31
Lig3P97386 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.09□□□□□ -0.31
Lig3P97386 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.09□□□□□ -0.31
Lig3P97386 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.09□□□□□ -0.31
Lig3P97386 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.09□□□□□ -0.31
Lig3P97386 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.09□□□□□ -0.31
Lig3P97386 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.09□□□□□ -0.31
Lig3P97386 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Lig3P97386 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.09□□□□□ -0.31
Lig3P97386 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lig3P97386 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lig3P97386 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.08□□□□□ -0.31
Lig3P97386 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Lig3P97386 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.08□□□□□ -0.31
Lig3P97386 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.08□□□□□ -0.31
Lig3P97386 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lig3P97386 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms