Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim43cP86449 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim43cP86449 Gm9797-202ENSMUST00000218003 294 ntBASIC12.96□□□□□ -0.33
Trim43cP86449 Gm9257-201ENSMUST00000221254 232 ntBASIC12.96□□□□□ -0.33
Trim43cP86449 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim43cP86449 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim43cP86449 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim43cP86449 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim43cP86449 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43cP86449 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.96□□□□□ -0.34
Trim43cP86449 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trim43cP86449 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43cP86449 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43cP86449 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43cP86449 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43cP86449 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43cP86449 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim43cP86449 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Trim43cP86449 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim43cP86449 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trim43cP86449 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim43cP86449 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim43cP86449 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim43cP86449 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trim43cP86449 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trim43cP86449 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Gm11960-201ENSMUST00000122068 925 ntBASIC12.95□□□□□ -0.34
Trim43cP86449 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.95□□□□□ -0.34
Trim43cP86449 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.95□□□□□ -0.34
Trim43cP86449 Gm19287-201ENSMUST00000203190 358 ntBASIC12.95□□□□□ -0.34
Trim43cP86449 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim43cP86449 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim43cP86449 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim43cP86449 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim43cP86449 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trim43cP86449 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43cP86449 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.94□□□□□ -0.34
Trim43cP86449 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim43cP86449 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim43cP86449 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Mir877-201ENSMUST00000104738 85 ntBASIC12.94□□□□□ -0.34
Trim43cP86449 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Gm15711-201ENSMUST00000118889 535 ntBASIC12.94□□□□□ -0.34
Trim43cP86449 Gm15808-201ENSMUST00000119046 604 ntBASIC12.94□□□□□ -0.34
Trim43cP86449 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.94□□□□□ -0.34
Trim43cP86449 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim43cP86449 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.94□□□□□ -0.34
Trim43cP86449 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Gm17827-201ENSMUST00000211825 742 ntBASIC12.94□□□□□ -0.34
Trim43cP86449 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.94□□□□□ -0.34
Trim43cP86449 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim43cP86449 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim43cP86449 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim43cP86449 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim43cP86449 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.94□□□□□ -0.34
Trim43cP86449 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43cP86449 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms