Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CiitaP79621 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CiitaP79621 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CiitaP79621 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.91□□□□□ -0.34
CiitaP79621 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CiitaP79621 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CiitaP79621 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
CiitaP79621 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.91□□□□□ -0.34
CiitaP79621 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.9□□□□□ -0.34
CiitaP79621 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CiitaP79621 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.9□□□□□ -0.34
CiitaP79621 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
CiitaP79621 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CiitaP79621 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CiitaP79621 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
CiitaP79621 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CiitaP79621 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CiitaP79621 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.9□□□□□ -0.34
CiitaP79621 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.9□□□□□ -0.34
CiitaP79621 Gm7666-201ENSMUST00000146631 819 ntBASIC12.9□□□□□ -0.34
CiitaP79621 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
CiitaP79621 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CiitaP79621 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.9□□□□□ -0.34
CiitaP79621 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.9□□□□□ -0.34
CiitaP79621 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CiitaP79621 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.9□□□□□ -0.34
CiitaP79621 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.9□□□□□ -0.34
CiitaP79621 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.9□□□□□ -0.34
CiitaP79621 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CiitaP79621 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.9□□□□□ -0.34
CiitaP79621 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CiitaP79621 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.9□□□□□ -0.34
CiitaP79621 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.9□□□□□ -0.34
CiitaP79621 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CiitaP79621 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CiitaP79621 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
CiitaP79621 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
CiitaP79621 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
CiitaP79621 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.89□□□□□ -0.35
CiitaP79621 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.89□□□□□ -0.35
CiitaP79621 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Gm14193-201ENSMUST00000105067 153 ntBASIC12.89□□□□□ -0.35
CiitaP79621 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
CiitaP79621 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Gm9550-201ENSMUST00000161130 862 ntBASIC12.89□□□□□ -0.35
CiitaP79621 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.89□□□□□ -0.35
CiitaP79621 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.89□□□□□ -0.35
CiitaP79621 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.89□□□□□ -0.35
CiitaP79621 Gm28937-201ENSMUST00000185413 695 ntBASIC12.89□□□□□ -0.35
CiitaP79621 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.89□□□□□ -0.35
CiitaP79621 Gm29400-201ENSMUST00000187208 695 ntBASIC12.89□□□□□ -0.35
CiitaP79621 Gm28662-201ENSMUST00000188446 695 ntBASIC12.89□□□□□ -0.35
CiitaP79621 Gm28251-201ENSMUST00000188835 695 ntBASIC12.89□□□□□ -0.35
CiitaP79621 Gm37318-201ENSMUST00000194325 695 ntBASIC12.89□□□□□ -0.35
CiitaP79621 Gm38017-201ENSMUST00000194768 695 ntBASIC12.89□□□□□ -0.35
CiitaP79621 Gm37287-201ENSMUST00000195449 695 ntBASIC12.89□□□□□ -0.35
CiitaP79621 Gm37793-201ENSMUST00000195548 695 ntBASIC12.89□□□□□ -0.35
CiitaP79621 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.89□□□□□ -0.35
CiitaP79621 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.89□□□□□ -0.35
CiitaP79621 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CiitaP79621 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.89□□□□□ -0.35
CiitaP79621 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CiitaP79621 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms