Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Gm11700-201ENSMUST00000119409 403 ntBASIC12.25□□□□□ -0.45
Msx3P70354 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Msx3P70354 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Msx3P70354 Gm43962-201ENSMUST00000203898 190 ntBASIC12.25□□□□□ -0.45
Msx3P70354 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Gm4607-201ENSMUST00000206649 577 ntBASIC12.25□□□□□ -0.45
Msx3P70354 Gm44651-201ENSMUST00000207343 372 ntBASIC12.25□□□□□ -0.45
Msx3P70354 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.25□□□□□ -0.45
Msx3P70354 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.25□□□□□ -0.45
Msx3P70354 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.25□□□□□ -0.45
Msx3P70354 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.25□□□□□ -0.45
Msx3P70354 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.25□□□□□ -0.45
Msx3P70354 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.25□□□□□ -0.45
Msx3P70354 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Msx3P70354 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.25□□□□□ -0.45
Msx3P70354 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Msx3P70354 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msx3P70354 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Msx3P70354 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Msx3P70354 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.24□□□□□ -0.45
Msx3P70354 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.24□□□□□ -0.45
Msx3P70354 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.24□□□□□ -0.45
Msx3P70354 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.24□□□□□ -0.45
Msx3P70354 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.24□□□□□ -0.45
Msx3P70354 Gm9192-201ENSMUST00000183221 985 ntBASIC12.24□□□□□ -0.45
Msx3P70354 Mir8109-201ENSMUST00000184375 117 ntBASIC12.24□□□□□ -0.45
Msx3P70354 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Msx3P70354 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.24□□□□□ -0.45
Msx3P70354 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.24□□□□□ -0.45
Msx3P70354 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.24□□□□□ -0.45
Msx3P70354 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.24□□□□□ -0.45
Msx3P70354 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.24□□□□□ -0.45
Msx3P70354 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Msx3P70354 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.24□□□□□ -0.45
Msx3P70354 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 Gm5186-201ENSMUST00000218781 920 ntBASIC12.24□□□□□ -0.45
Msx3P70354 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Msx3P70354 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 Gm5455-201ENSMUST00000058710 715 ntBASIC12.24□□□□□ -0.45
Msx3P70354 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.24□□□□□ -0.45
Msx3P70354 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Msx3P70354 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Msx3P70354 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msx3P70354 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.24□□□□□ -0.45
Msx3P70354 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.24□□□□□ -0.45
Msx3P70354 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.23□□□□□ -0.45
Msx3P70354 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.23□□□□□ -0.45
Msx3P70354 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.23□□□□□ -0.45
Msx3P70354 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Msx3P70354 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.23□□□□□ -0.45
Msx3P70354 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Msx3P70354 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Msx3P70354 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msx3P70354 Gm44364-201ENSMUST00000198368 141 ntBASIC12.23□□□□□ -0.45
Msx3P70354 Gm3961-201ENSMUST00000204425 994 ntBASIC12.23□□□□□ -0.45
Msx3P70354 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.23□□□□□ -0.45
Msx3P70354 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.23□□□□□ -0.45
Msx3P70354 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms