Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Prr30-201ENSMUST00000057718 1862 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Hmgb1P63158 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hmgb1P63158 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Gm25214-201ENSMUST00000104573 129 ntBASIC13.17□□□□□ -0.3
Hmgb1P63158 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.17□□□□□ -0.3
Hmgb1P63158 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.17□□□□□ -0.3
Hmgb1P63158 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Hmgb1P63158 Gm29396-201ENSMUST00000185659 716 ntBASIC13.17□□□□□ -0.3
Hmgb1P63158 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.17□□□□□ -0.3
Hmgb1P63158 Gm9136-201ENSMUST00000193368 454 ntBASIC13.17□□□□□ -0.3
Hmgb1P63158 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.17□□□□□ -0.3
Hmgb1P63158 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.17□□□□□ -0.3
Hmgb1P63158 Gm18062-201ENSMUST00000208020 547 ntBASIC13.17□□□□□ -0.3
Hmgb1P63158 Gm18055-201ENSMUST00000208254 547 ntBASIC13.17□□□□□ -0.3
Hmgb1P63158 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.17□□□□□ -0.3
Hmgb1P63158 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.17□□□□□ -0.3
Hmgb1P63158 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.17□□□□□ -0.3
Hmgb1P63158 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.17□□□□□ -0.3
Hmgb1P63158 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hmgb1P63158 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgb1P63158 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.17□□□□□ -0.3
Hmgb1P63158 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.17□□□□□ -0.3
Hmgb1P63158 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.16□□□□□ -0.3
Hmgb1P63158 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Hmgb1P63158 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hmgb1P63158 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.16□□□□□ -0.3
Hmgb1P63158 Gm10608-202ENSMUST00000213924 676 ntBASIC13.16□□□□□ -0.3
Hmgb1P63158 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Gm10312-201ENSMUST00000078515 489 ntBASIC13.16□□□□□ -0.3
Hmgb1P63158 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Hmgb1P63158 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hmgb1P63158 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgb1P63158 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Hmgb1P63158 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmgb1P63158 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hmgb1P63158 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmgb1P63158 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hmgb1P63158 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hmgb1P63158 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hmgb1P63158 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmgb1P63158 Gm14644-201ENSMUST00000116671 647 ntBASIC13.15□□□□□ -0.3
Hmgb1P63158 Gm5419-201ENSMUST00000119301 527 ntBASIC13.15□□□□□ -0.3
Hmgb1P63158 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmgb1P63158 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 Gm9230-201ENSMUST00000188228 532 ntBASIC13.15□□□□□ -0.3
Hmgb1P63158 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hmgb1P63158 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgb1P63158 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms