Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.81□□□□□ -0.52
Crnkl1P63154 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.81□□□□□ -0.52
Crnkl1P63154 Gm11439-201ENSMUST00000118598 409 ntBASIC11.81□□□□□ -0.52
Crnkl1P63154 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Gm27731-201ENSMUST00000185192 107 ntBASIC11.81□□□□□ -0.52
Crnkl1P63154 Gm45784-201ENSMUST00000188360 142 ntBASIC11.81□□□□□ -0.52
Crnkl1P63154 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.81□□□□□ -0.52
Crnkl1P63154 Gm37497-201ENSMUST00000195830 798 ntBASIC11.81□□□□□ -0.52
Crnkl1P63154 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.81□□□□□ -0.52
Crnkl1P63154 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.81□□□□□ -0.52
Crnkl1P63154 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Crnkl1P63154 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.81□□□□□ -0.52
Crnkl1P63154 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Crnkl1P63154 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.81□□□□□ -0.52
Crnkl1P63154 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Crnkl1P63154 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Crnkl1P63154 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Crnkl1P63154 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.81□□□□□ -0.52
Crnkl1P63154 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.8□□□□□ -0.52
Crnkl1P63154 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.8□□□□□ -0.52
Crnkl1P63154 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.8□□□□□ -0.52
Crnkl1P63154 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.8□□□□□ -0.52
Crnkl1P63154 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Gm4271-201ENSMUST00000174444 973 ntBASIC11.8□□□□□ -0.52
Crnkl1P63154 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.8□□□□□ -0.52
Crnkl1P63154 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Crnkl1P63154 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.8□□□□□ -0.52
Crnkl1P63154 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.8□□□□□ -0.52
Crnkl1P63154 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Crnkl1P63154 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Crnkl1P63154 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Crnkl1P63154 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Crnkl1P63154 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Crnkl1P63154 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Crnkl1P63154 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Crnkl1P63154 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.79□□□□□ -0.52
Crnkl1P63154 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Crnkl1P63154 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Crnkl1P63154 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms