Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Vps33bP59016 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Vps33bP59016 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Vps33bP59016 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Gm13204-201ENSMUST00000120110 821 ntBASIC14.91□□□□□ -0.02
Vps33bP59016 Gm16459-201ENSMUST00000121443 686 ntBASIC14.91□□□□□ -0.02
Vps33bP59016 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC14.91□□□□□ -0.02
Vps33bP59016 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Gm9369-201ENSMUST00000196009 733 ntBASIC14.91□□□□□ -0.02
Vps33bP59016 Gm30946-201ENSMUST00000198288 724 ntBASIC14.91□□□□□ -0.02
Vps33bP59016 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC14.91□□□□□ -0.02
Vps33bP59016 Gm7939-201ENSMUST00000201233 1050 ntBASIC14.91□□□□□ -0.02
Vps33bP59016 BC080696-201ENSMUST00000202858 1218 ntBASIC14.91□□□□□ -0.02
Vps33bP59016 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC14.91□□□□□ -0.02
Vps33bP59016 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Vps33bP59016 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC14.91□□□□□ -0.02
Vps33bP59016 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.91□□□□□ -0.02
Vps33bP59016 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Vps33bP59016 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps33bP59016 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.9□□□□□ -0.02
Vps33bP59016 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Vps33bP59016 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.9□□□□□ -0.02
Vps33bP59016 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Gm15625-201ENSMUST00000117617 1093 ntBASIC14.9□□□□□ -0.02
Vps33bP59016 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC14.9□□□□□ -0.02
Vps33bP59016 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Gm20495-201ENSMUST00000173902 235 ntBASIC14.9□□□□□ -0.02
Vps33bP59016 Gm24954-201ENSMUST00000178831 110 ntBASIC14.9□□□□□ -0.02
Vps33bP59016 Gm42511-201ENSMUST00000196160 234 ntBASIC14.9□□□□□ -0.02
Vps33bP59016 Gm6331-201ENSMUST00000217890 450 ntBASIC14.9□□□□□ -0.02
Vps33bP59016 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Vps33bP59016 AC162932.1-201ENSMUST00000219209 872 ntBASIC14.9□□□□□ -0.02
Vps33bP59016 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC14.9□□□□□ -0.02
Vps33bP59016 AC138716.2-201ENSMUST00000226670 1016 ntBASIC14.9□□□□□ -0.02
Vps33bP59016 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Vps33bP59016 Gm5449-201ENSMUST00000081132 357 ntBASIC14.9□□□□□ -0.02
Vps33bP59016 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Vps33bP59016 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC14.9□□□□□ -0.02
Vps33bP59016 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Vps33bP59016 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.9□□□□□ -0.02
Vps33bP59016 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.9□□□□□ -0.02
Vps33bP59016 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.9□□□□□ -0.02
Vps33bP59016 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Vps33bP59016 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps33bP59016 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.9□□□□□ -0.02
Vps33bP59016 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps33bP59016 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps33bP59016 Smok4a-201ENSMUST00000074512 1455 ntBASIC14.89□□□□□ -0.03
Vps33bP59016 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Vps33bP59016 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps33bP59016 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps33bP59016 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps33bP59016 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps33bP59016 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.89□□□□□ -0.03
Vps33bP59016 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps33bP59016 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Vps33bP59016 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vps33bP59016 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC14.89□□□□□ -0.03
Vps33bP59016 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.89□□□□□ -0.03
Vps33bP59016 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Vps33bP59016 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Vps33bP59016 Gm29067-201ENSMUST00000190821 470 ntBASIC14.89□□□□□ -0.03
Vps33bP59016 Gm37782-201ENSMUST00000194879 678 ntBASIC14.89□□□□□ -0.03
Vps33bP59016 Gm4903-201ENSMUST00000210462 405 ntBASIC14.89□□□□□ -0.03
Vps33bP59016 Capsl-202ENSMUST00000226688 739 ntBASIC14.89□□□□□ -0.03
Vps33bP59016 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms