Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lim2P56563 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.93□□□□□ -0.5
Lim2P56563 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.93□□□□□ -0.5
Lim2P56563 Gm15711-201ENSMUST00000118889 535 ntBASIC11.93□□□□□ -0.5
Lim2P56563 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lim2P56563 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lim2P56563 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.93□□□□□ -0.5
Lim2P56563 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.93□□□□□ -0.5
Lim2P56563 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lim2P56563 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lim2P56563 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lim2P56563 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lim2P56563 Gm18730-201ENSMUST00000218038 343 ntBASIC11.93□□□□□ -0.5
Lim2P56563 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.93□□□□□ -0.5
Lim2P56563 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lim2P56563 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lim2P56563 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lim2P56563 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lim2P56563 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.93□□□□□ -0.5
Lim2P56563 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lim2P56563 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.93□□□□□ -0.5
Lim2P56563 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.93□□□□□ -0.5
Lim2P56563 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lim2P56563 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.93□□□□□ -0.5
Lim2P56563 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lim2P56563 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lim2P56563 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Rubie-203ENSMUST00000227803 2430 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.92□□□□□ -0.5
Lim2P56563 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lim2P56563 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.92□□□□□ -0.5
Lim2P56563 Gm15610-201ENSMUST00000120584 195 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Gm28450-201ENSMUST00000187349 638 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Gm37466-201ENSMUST00000195692 652 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Gm18893-201ENSMUST00000198416 943 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.92□□□□□ -0.5
Lim2P56563 Gm17931-201ENSMUST00000208132 634 ntBASIC11.92□□□□□ -0.5
Lim2P56563 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lim2P56563 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lim2P56563 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lim2P56563 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.92□□□□□ -0.5
Lim2P56563 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.91□□□□□ -0.5
Lim2P56563 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Lim2P56563 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Lim2P56563 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.91□□□□□ -0.5
Lim2P56563 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.91□□□□□ -0.5
Lim2P56563 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lim2P56563 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.91□□□□□ -0.5
Lim2P56563 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 Gm7857-201ENSMUST00000117957 358 ntBASIC11.91□□□□□ -0.5
Lim2P56563 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.91□□□□□ -0.5
Lim2P56563 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.91□□□□□ -0.5
Lim2P56563 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Lim2P56563 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Lim2P56563 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lim2P56563 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms