Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC9.4□□□□□ -0.9
Rab4aP56371 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Rab4aP56371 CT009601.1-201ENSMUST00000225567 2705 ntBASIC9.4□□□□□ -0.9
Rab4aP56371 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Rab4aP56371 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC9.4□□□□□ -0.9
Rab4aP56371 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Rab4aP56371 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Rab4aP56371 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.4□□□□□ -0.9
Rab4aP56371 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC9.4□□□□□ -0.9
Rab4aP56371 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.4□□□□□ -0.9
Rab4aP56371 Gm44335-201ENSMUST00000196879 141 ntBASIC9.4□□□□□ -0.9
Rab4aP56371 Gm44297-201ENSMUST00000198304 141 ntBASIC9.4□□□□□ -0.9
Rab4aP56371 Gm44346-201ENSMUST00000198851 141 ntBASIC9.4□□□□□ -0.9
Rab4aP56371 Gm5779-201ENSMUST00000218467 910 ntBASIC9.4□□□□□ -0.9
Rab4aP56371 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Rab4aP56371 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Rab4aP56371 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Rab4aP56371 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab4aP56371 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Rab4aP56371 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rab4aP56371 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rab4aP56371 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rab4aP56371 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rab4aP56371 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.91
Rab4aP56371 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rab4aP56371 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rab4aP56371 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rab4aP56371 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.4□□□□□ -0.91
Rab4aP56371 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Rab4aP56371 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rab4aP56371 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.39□□□□□ -0.91
Rab4aP56371 Gm38169-201ENSMUST00000191822 2539 ntBASIC9.39□□□□□ -0.91
Rab4aP56371 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rab4aP56371 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.39□□□□□ -0.91
Rab4aP56371 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.39□□□□□ -0.91
Rab4aP56371 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.39□□□□□ -0.91
Rab4aP56371 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Rab4aP56371 Gm11779-201ENSMUST00000118541 368 ntBASIC9.39□□□□□ -0.91
Rab4aP56371 Gm15693-201ENSMUST00000120470 637 ntBASIC9.39□□□□□ -0.91
Rab4aP56371 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.39□□□□□ -0.91
Rab4aP56371 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.39□□□□□ -0.91
Rab4aP56371 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Rab4aP56371 Gm10253-201ENSMUST00000194270 940 ntBASIC9.39□□□□□ -0.91
Rab4aP56371 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab4aP56371 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.39□□□□□ -0.91
Rab4aP56371 Gm17795-201ENSMUST00000214505 757 ntBASIC9.39□□□□□ -0.91
Rab4aP56371 AC159114.1-201ENSMUST00000220349 266 ntBASIC9.39□□□□□ -0.91
Rab4aP56371 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rab4aP56371 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.39□□□□□ -0.91
Rab4aP56371 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Rab4aP56371 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms