Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Gm5187-201ENSMUST00000117317 991 ntBASIC13.43□□□□□ -0.26
Rrp1P56183 Gm11439-201ENSMUST00000118598 409 ntBASIC13.43□□□□□ -0.26
Rrp1P56183 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Gm7722-201ENSMUST00000120646 741 ntBASIC13.43□□□□□ -0.26
Rrp1P56183 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.43□□□□□ -0.26
Rrp1P56183 Gm27514-201ENSMUST00000183692 110 ntBASIC13.43□□□□□ -0.26
Rrp1P56183 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.43□□□□□ -0.26
Rrp1P56183 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Rrp1P56183 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rrp1P56183 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rrp1P56183 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rrp1P56183 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp1P56183 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Rrp1P56183 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Gm22018-201ENSMUST00000104357 131 ntBASIC13.42□□□□□ -0.26
Rrp1P56183 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.42□□□□□ -0.26
Rrp1P56183 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.42□□□□□ -0.26
Rrp1P56183 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.42□□□□□ -0.26
Rrp1P56183 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.42□□□□□ -0.26
Rrp1P56183 Gm18893-201ENSMUST00000198416 943 ntBASIC13.42□□□□□ -0.26
Rrp1P56183 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Rrp1P56183 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.42□□□□□ -0.26
Rrp1P56183 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.42□□□□□ -0.26
Rrp1P56183 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.42□□□□□ -0.26
Rrp1P56183 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.42□□□□□ -0.26
Rrp1P56183 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
Rrp1P56183 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Rrp1P56183 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.42□□□□□ -0.26
Rrp1P56183 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rrp1P56183 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Rrp1P56183 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rrp1P56183 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Rrp1P56183 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Rrp1P56183 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.41□□□□□ -0.26
Rrp1P56183 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rrp1P56183 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rrp1P56183 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms