Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Gm23931-201ENSMUST00000103842 109 ntBASIC11.39□□□□□ -0.59
Cdkn2bP55271 Gm11960-201ENSMUST00000122068 925 ntBASIC11.39□□□□□ -0.59
Cdkn2bP55271 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Cdkn2bP55271 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Gm43118-201ENSMUST00000199149 775 ntBASIC11.39□□□□□ -0.59
Cdkn2bP55271 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Lect2-202ENSMUST00000225183 823 ntBASIC11.39□□□□□ -0.59
Cdkn2bP55271 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.39□□□□□ -0.59
Cdkn2bP55271 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdkn2bP55271 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.38□□□□□ -0.59
Cdkn2bP55271 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.38□□□□□ -0.59
Cdkn2bP55271 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.38□□□□□ -0.59
Cdkn2bP55271 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Mospd4-201ENSMUST00000180618 576 ntBASIC11.38□□□□□ -0.59
Cdkn2bP55271 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.38□□□□□ -0.59
Cdkn2bP55271 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Gm43133-201ENSMUST00000197472 463 ntBASIC11.38□□□□□ -0.59
Cdkn2bP55271 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Gm10254-201ENSMUST00000052888 867 ntBASIC11.38□□□□□ -0.59
Cdkn2bP55271 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cdkn2bP55271 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.38□□□□□ -0.59
Cdkn2bP55271 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdkn2bP55271 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdkn2bP55271 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.37□□□□□ -0.59
Cdkn2bP55271 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdkn2bP55271 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cdkn2bP55271 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cdkn2bP55271 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdkn2bP55271 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.37□□□□□ -0.59
Cdkn2bP55271 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdkn2bP55271 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdkn2bP55271 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms