Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Msh6P54276 AC108858.2-201ENSMUST00000228186 1425 ntBASIC15.04■□□□□ -0
Msh6P54276 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Msh6P54276 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC15.04■□□□□ -0
Msh6P54276 n-R5s84-201ENSMUST00000122591 109 ntBASIC15.04■□□□□ -0
Msh6P54276 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC15.04■□□□□ -0
Msh6P54276 Gm20392-201ENSMUST00000173047 701 ntBASIC15.04■□□□□ -0
Msh6P54276 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Msh6P54276 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Msh6P54276 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC15.04■□□□□ -0
Msh6P54276 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Gm7940-201ENSMUST00000218195 769 ntBASIC15.04■□□□□ -0
Msh6P54276 AC136376.2-201ENSMUST00000228819 490 ntBASIC15.04■□□□□ -0
Msh6P54276 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC15.04■□□□□ -0
Msh6P54276 Gm5451-201ENSMUST00000080545 579 ntBASIC15.04■□□□□ -0
Msh6P54276 Mir483-201ENSMUST00000093631 73 ntBASIC15.04■□□□□ -0
Msh6P54276 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC15.04■□□□□ -0
Msh6P54276 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Msh6P54276 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Msh6P54276 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.04■□□□□ -0
Msh6P54276 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC15.03■□□□□ -0
Msh6P54276 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Msh6P54276 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.03■□□□□ -0
Msh6P54276 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Gm45428-201ENSMUST00000209619 1789 ntBASIC15.03■□□□□ -0
Msh6P54276 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Msh6P54276 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Gm25063-201ENSMUST00000104666 94 ntBASIC15.03■□□□□ -0
Msh6P54276 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC15.03■□□□□ -0
Msh6P54276 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC15.03■□□□□ -0
Msh6P54276 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.03■□□□□ -0
Msh6P54276 AC134869.4-202ENSMUST00000224350 837 ntBASIC15.03■□□□□ -0
Msh6P54276 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC15.03■□□□□ -0
Msh6P54276 Gm25201-201ENSMUST00000083093 170 ntBASIC15.03■□□□□ -0
Msh6P54276 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Olfr584-201ENSMUST00000098210 964 ntBASIC15.03■□□□□ -0
Msh6P54276 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Msh6P54276 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Msh6P54276 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh6P54276 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.03■□□□□ -0
Msh6P54276 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Msh6P54276 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Msh6P54276 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msh6P54276 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh6P54276 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC15.02■□□□□ -0
Msh6P54276 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msh6P54276 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC15.02■□□□□ -0
Msh6P54276 Gm23272-201ENSMUST00000104053 129 ntBASIC15.02■□□□□ -0
Msh6P54276 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC15.02■□□□□ -0
Msh6P54276 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC15.02■□□□□ -0
Msh6P54276 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msh6P54276 Gm17798-201ENSMUST00000182282 1035 ntBASIC15.02■□□□□ -0
Msh6P54276 Mir6407-201ENSMUST00000184510 101 ntBASIC15.02■□□□□ -0
Msh6P54276 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC15.02■□□□□ -0
Msh6P54276 Gm9116-201ENSMUST00000192400 1018 ntBASIC15.02■□□□□ -0
Msh6P54276 Gm6108-201ENSMUST00000208365 367 ntBASIC15.02■□□□□ -0
Msh6P54276 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh6P54276 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh6P54276 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh6P54276 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Msh6P54276 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh6P54276 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh6P54276 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms