Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.93□□□□□ -0.5
Fdft1P53798 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.93□□□□□ -0.5
Fdft1P53798 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.93□□□□□ -0.5
Fdft1P53798 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.93□□□□□ -0.5
Fdft1P53798 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.93□□□□□ -0.5
Fdft1P53798 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Rprl1-201ENSMUST00000158050 327 ntBASIC11.93□□□□□ -0.5
Fdft1P53798 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.93□□□□□ -0.5
Fdft1P53798 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Gm8712-201ENSMUST00000221090 701 ntBASIC11.93□□□□□ -0.5
Fdft1P53798 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.93□□□□□ -0.5
Fdft1P53798 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.93□□□□□ -0.5
Fdft1P53798 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.93□□□□□ -0.5
Fdft1P53798 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.93□□□□□ -0.5
Fdft1P53798 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.93□□□□□ -0.5
Fdft1P53798 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fdft1P53798 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Fdft1P53798 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Fdft1P53798 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.92□□□□□ -0.5
Fdft1P53798 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.92□□□□□ -0.5
Fdft1P53798 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.92□□□□□ -0.5
Fdft1P53798 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Fdft1P53798 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Gm23270-201ENSMUST00000104055 131 ntBASIC11.92□□□□□ -0.5
Fdft1P53798 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Fdft1P53798 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Gm11222-201ENSMUST00000119005 738 ntBASIC11.92□□□□□ -0.5
Fdft1P53798 Gm15547-201ENSMUST00000122152 333 ntBASIC11.92□□□□□ -0.5
Fdft1P53798 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Fdft1P53798 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.92□□□□□ -0.5
Fdft1P53798 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.92□□□□□ -0.5
Fdft1P53798 Gm18711-201ENSMUST00000199341 750 ntBASIC11.92□□□□□ -0.5
Fdft1P53798 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.92□□□□□ -0.5
Fdft1P53798 Gm10312-201ENSMUST00000078515 489 ntBASIC11.92□□□□□ -0.5
Fdft1P53798 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.92□□□□□ -0.5
Fdft1P53798 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.92□□□□□ -0.5
Fdft1P53798 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.92□□□□□ -0.5
Fdft1P53798 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.92□□□□□ -0.5
Fdft1P53798 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Fdft1P53798 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Fdft1P53798 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fdft1P53798 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Fdft1P53798 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fdft1P53798 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Fdft1P53798 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fdft1P53798 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Fdft1P53798 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fdft1P53798 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Fdft1P53798 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.91□□□□□ -0.5
Fdft1P53798 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fdft1P53798 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fdft1P53798 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fdft1P53798 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms