Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt1P50431 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Shmt1P50431 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Shmt1P50431 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt1P50431 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt1P50431 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt1P50431 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Shmt1P50431 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt1P50431 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.59□□□□□ -0.39
Shmt1P50431 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Shmt1P50431 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.59□□□□□ -0.39
Shmt1P50431 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Shmt1P50431 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Shmt1P50431 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Shmt1P50431 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Shmt1P50431 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.59□□□□□ -0.39
Shmt1P50431 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Shmt1P50431 Gm23251-201ENSMUST00000103773 110 ntBASIC12.59□□□□□ -0.39
Shmt1P50431 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Gm11663-201ENSMUST00000117888 290 ntBASIC12.59□□□□□ -0.39
Shmt1P50431 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Shmt1P50431 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Mir1943-201ENSMUST00000158276 73 ntBASIC12.59□□□□□ -0.39
Shmt1P50431 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.59□□□□□ -0.39
Shmt1P50431 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.59□□□□□ -0.39
Shmt1P50431 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Shmt1P50431 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Shmt1P50431 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt1P50431 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.59□□□□□ -0.39
Shmt1P50431 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shmt1P50431 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shmt1P50431 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Shmt1P50431 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shmt1P50431 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.58□□□□□ -0.4
Shmt1P50431 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.58□□□□□ -0.4
Shmt1P50431 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.58□□□□□ -0.4
Shmt1P50431 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Shmt1P50431 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 Gm9062-201ENSMUST00000117712 727 ntBASIC12.58□□□□□ -0.4
Shmt1P50431 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.58□□□□□ -0.4
Shmt1P50431 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.58□□□□□ -0.4
Shmt1P50431 Gm13461-201ENSMUST00000120980 662 ntBASIC12.58□□□□□ -0.4
Shmt1P50431 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.58□□□□□ -0.4
Shmt1P50431 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.58□□□□□ -0.4
Shmt1P50431 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Shmt1P50431 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.58□□□□□ -0.4
Shmt1P50431 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Shmt1P50431 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.58□□□□□ -0.4
Shmt1P50431 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Shmt1P50431 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.58□□□□□ -0.4
Shmt1P50431 Gm2965-201ENSMUST00000198365 343 ntBASIC12.58□□□□□ -0.4
Shmt1P50431 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Shmt1P50431 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 Gm45575-201ENSMUST00000210283 548 ntBASIC12.58□□□□□ -0.4
Shmt1P50431 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Shmt1P50431 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.58□□□□□ -0.4
Shmt1P50431 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.58□□□□□ -0.4
Shmt1P50431 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.58□□□□□ -0.4
Shmt1P50431 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.58□□□□□ -0.4
Shmt1P50431 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Shmt1P50431 Gm10288-201ENSMUST00000084614 537 ntBASIC12.58□□□□□ -0.4
Shmt1P50431 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Shmt1P50431 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt1P50431 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms