Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpdP50404 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpdP50404 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
SftpdP50404 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SftpdP50404 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.54□□□□□ -0.4
SftpdP50404 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.54□□□□□ -0.4
SftpdP50404 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.54□□□□□ -0.4
SftpdP50404 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SftpdP50404 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SftpdP50404 Gm11660-201ENSMUST00000120955 412 ntBASIC12.54□□□□□ -0.4
SftpdP50404 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.54□□□□□ -0.4
SftpdP50404 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
SftpdP50404 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.54□□□□□ -0.4
SftpdP50404 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SftpdP50404 Gm28071-201ENSMUST00000190355 478 ntBASIC12.54□□□□□ -0.4
SftpdP50404 Gm43184-201ENSMUST00000197247 542 ntBASIC12.54□□□□□ -0.4
SftpdP50404 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.54□□□□□ -0.4
SftpdP50404 Gm45186-201ENSMUST00000206874 478 ntBASIC12.54□□□□□ -0.4
SftpdP50404 Gm4157-201ENSMUST00000211647 679 ntBASIC12.54□□□□□ -0.4
SftpdP50404 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.54□□□□□ -0.4
SftpdP50404 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.54□□□□□ -0.4
SftpdP50404 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SftpdP50404 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.54□□□□□ -0.4
SftpdP50404 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.54□□□□□ -0.4
SftpdP50404 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.54□□□□□ -0.4
SftpdP50404 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.54□□□□□ -0.4
SftpdP50404 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpdP50404 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SftpdP50404 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.53□□□□□ -0.4
SftpdP50404 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SftpdP50404 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.53□□□□□ -0.4
SftpdP50404 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SftpdP50404 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SftpdP50404 Gm12380-201ENSMUST00000119012 544 ntBASIC12.53□□□□□ -0.4
SftpdP50404 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.53□□□□□ -0.4
SftpdP50404 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.53□□□□□ -0.4
SftpdP50404 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.53□□□□□ -0.4
SftpdP50404 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.53□□□□□ -0.4
SftpdP50404 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.53□□□□□ -0.4
SftpdP50404 Gm6114-201ENSMUST00000182472 968 ntBASIC12.53□□□□□ -0.4
SftpdP50404 Gm8343-201ENSMUST00000182705 994 ntBASIC12.53□□□□□ -0.4
SftpdP50404 Gm7003-201ENSMUST00000195089 312 ntBASIC12.53□□□□□ -0.4
SftpdP50404 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.53□□□□□ -0.4
SftpdP50404 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.53□□□□□ -0.4
SftpdP50404 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.53□□□□□ -0.4
SftpdP50404 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.53□□□□□ -0.4
SftpdP50404 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpdP50404 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.53□□□□□ -0.4
SftpdP50404 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms