Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm27552-201ENSMUST00000183351 62 ntBASIC14.18□□□□□ -0.14
Ercc3P49135 Gm27844-201ENSMUST00000183613 62 ntBASIC14.18□□□□□ -0.14
Ercc3P49135 AY036118-201ENSMUST00000200021 923 ntBASIC14.18□□□□□ -0.14
Ercc3P49135 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ercc3P49135 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.18□□□□□ -0.14
Ercc3P49135 Gm17827-201ENSMUST00000211825 742 ntBASIC14.18□□□□□ -0.14
Ercc3P49135 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.18□□□□□ -0.14
Ercc3P49135 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ercc3P49135 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.18□□□□□ -0.14
Ercc3P49135 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ercc3P49135 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ercc3P49135 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.17□□□□□ -0.14
Ercc3P49135 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.17□□□□□ -0.14
Ercc3P49135 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.17□□□□□ -0.14
Ercc3P49135 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Gm22133-201ENSMUST00000102082 109 ntBASIC14.17□□□□□ -0.14
Ercc3P49135 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.17□□□□□ -0.14
Ercc3P49135 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.17□□□□□ -0.14
Ercc3P49135 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Mir6927-201ENSMUST00000184494 71 ntBASIC14.17□□□□□ -0.14
Ercc3P49135 Gm27390-201ENSMUST00000184516 176 ntBASIC14.17□□□□□ -0.14
Ercc3P49135 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.17□□□□□ -0.14
Ercc3P49135 Gm5363-201ENSMUST00000211927 938 ntBASIC14.17□□□□□ -0.14
Ercc3P49135 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ercc3P49135 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.17□□□□□ -0.14
Ercc3P49135 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ercc3P49135 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.16□□□□□ -0.14
Ercc3P49135 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.16□□□□□ -0.14
Ercc3P49135 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.16□□□□□ -0.14
Ercc3P49135 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.16□□□□□ -0.14
Ercc3P49135 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.16□□□□□ -0.14
Ercc3P49135 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ercc3P49135 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.16□□□□□ -0.14
Ercc3P49135 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.16□□□□□ -0.14
Ercc3P49135 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Ercc3P49135 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.16□□□□□ -0.14
Ercc3P49135 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ercc3P49135 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.16□□□□□ -0.14
Ercc3P49135 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ercc3P49135 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.16□□□□□ -0.14
Ercc3P49135 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.16□□□□□ -0.14
Ercc3P49135 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ercc3P49135 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ercc3P49135 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ercc3P49135 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ercc3P49135 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ercc3P49135 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ercc3P49135 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ercc3P49135 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ercc3P49135 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ercc3P49135 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ercc3P49135 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ercc3P49135 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ercc3P49135 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms