Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm7627-201ENSMUST00000183205 999 ntBASIC13.16□□□□□ -0.3
Brca1P48754 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC13.16□□□□□ -0.3
Brca1P48754 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC13.16□□□□□ -0.3
Brca1P48754 Gm5599-201ENSMUST00000209602 788 ntBASIC13.16□□□□□ -0.3
Brca1P48754 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.16□□□□□ -0.3
Brca1P48754 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Brca1P48754 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.16□□□□□ -0.3
Brca1P48754 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Brca1P48754 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Brca1P48754 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.16□□□□□ -0.3
Brca1P48754 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Brca1P48754 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Brca1P48754 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.16□□□□□ -0.3
Brca1P48754 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.16□□□□□ -0.3
Brca1P48754 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC13.16□□□□□ -0.3
Brca1P48754 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.16□□□□□ -0.3
Brca1P48754 Gm17796-201ENSMUST00000189015 1213 ntBASIC13.16□□□□□ -0.3
Brca1P48754 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Brca1P48754 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Brca1P48754 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 AC105408.1-201ENSMUST00000227771 802 ntBASIC13.16□□□□□ -0.3
Brca1P48754 Gm5468-202ENSMUST00000227851 682 ntBASIC13.16□□□□□ -0.3
Brca1P48754 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Brca1P48754 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Brca1P48754 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.15□□□□□ -0.3
Brca1P48754 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Brca1P48754 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC13.15□□□□□ -0.3
Brca1P48754 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Brca1P48754 Gm13094-201ENSMUST00000117930 409 ntBASIC13.15□□□□□ -0.3
Brca1P48754 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC13.15□□□□□ -0.3
Brca1P48754 Gm25569-201ENSMUST00000157175 131 ntBASIC13.15□□□□□ -0.3
Brca1P48754 Gm25830-201ENSMUST00000158923 132 ntBASIC13.15□□□□□ -0.3
Brca1P48754 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Gm25677-201ENSMUST00000174983 72 ntBASIC13.15□□□□□ -0.3
Brca1P48754 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.15□□□□□ -0.3
Brca1P48754 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.15□□□□□ -0.3
Brca1P48754 Gm45527-201ENSMUST00000211052 774 ntBASIC13.15□□□□□ -0.3
Brca1P48754 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.15□□□□□ -0.3
Brca1P48754 Gm18065-201ENSMUST00000221395 526 ntBASIC13.15□□□□□ -0.3
Brca1P48754 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Brca1P48754 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.15□□□□□ -0.3
Brca1P48754 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brca1P48754 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Brca1P48754 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Brca1P48754 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Brca1P48754 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Brca1P48754 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
Brca1P48754 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Gm38344-201ENSMUST00000195306 1353 ntBASIC13.14□□□□□ -0.31
Brca1P48754 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.14□□□□□ -0.31
Brca1P48754 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
Brca1P48754 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.14□□□□□ -0.31
Brca1P48754 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Brca1P48754 Gm13171-201ENSMUST00000117233 391 ntBASIC13.14□□□□□ -0.31
Brca1P48754 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC13.14□□□□□ -0.31
Brca1P48754 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Brca1P48754 Gm24328-201ENSMUST00000175104 67 ntBASIC13.14□□□□□ -0.31
Brca1P48754 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.14□□□□□ -0.31
Brca1P48754 Gm42599-201ENSMUST00000201308 469 ntBASIC13.14□□□□□ -0.31
Brca1P48754 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brca1P48754 Gm9487-201ENSMUST00000216600 472 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms