Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HttP42859 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HttP42859 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.28□□□□□ -0.44
HttP42859 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.28□□□□□ -0.44
HttP42859 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Wbp1-209ENSMUST00000205023 716 ntBASIC12.28□□□□□ -0.44
HttP42859 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 AC163638.2-201ENSMUST00000224920 827 ntBASIC12.28□□□□□ -0.44
HttP42859 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
HttP42859 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
HttP42859 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
HttP42859 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.28□□□□□ -0.44
HttP42859 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.28□□□□□ -0.44
HttP42859 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Gm12028-201ENSMUST00000118065 436 ntBASIC12.28□□□□□ -0.44
HttP42859 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.28□□□□□ -0.44
HttP42859 Gm12435-201ENSMUST00000118949 1016 ntBASIC12.28□□□□□ -0.44
HttP42859 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.28□□□□□ -0.44
HttP42859 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC12.28□□□□□ -0.44
HttP42859 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HttP42859 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.28□□□□□ -0.44
HttP42859 Gm6291-201ENSMUST00000179994 309 ntBASIC12.28□□□□□ -0.44
HttP42859 Gm18014-201ENSMUST00000183369 817 ntBASIC12.28□□□□□ -0.44
HttP42859 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HttP42859 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.28□□□□□ -0.44
HttP42859 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.28□□□□□ -0.44
HttP42859 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HttP42859 CT010505.2-201ENSMUST00000227918 998 ntBASIC12.28□□□□□ -0.44
HttP42859 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC12.28□□□□□ -0.44
HttP42859 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
HttP42859 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HttP42859 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
HttP42859 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
HttP42859 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HttP42859 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
HttP42859 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.27□□□□□ -0.44
HttP42859 Gm19927-201ENSMUST00000185792 781 ntBASIC12.27□□□□□ -0.44
HttP42859 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HttP42859 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
HttP42859 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.27□□□□□ -0.44
HttP42859 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HttP42859 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
HttP42859 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HttP42859 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HttP42859 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HttP42859 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
HttP42859 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.27□□□□□ -0.45
HttP42859 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
HttP42859 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.27□□□□□ -0.45
HttP42859 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HttP42859 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HttP42859 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.27□□□□□ -0.45
HttP42859 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HttP42859 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HttP42859 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HttP42859 Gm16219-201ENSMUST00000120096 274 ntBASIC12.27□□□□□ -0.45
HttP42859 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.27□□□□□ -0.45
HttP42859 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.27□□□□□ -0.45
HttP42859 Gm5851-201ENSMUST00000194132 1204 ntBASIC12.27□□□□□ -0.45
HttP42859 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.27□□□□□ -0.45
HttP42859 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HttP42859 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
HttP42859 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HttP42859 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.27□□□□□ -0.45
HttP42859 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HttP42859 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HttP42859 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
HttP42859 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HttP42859 Gm38135-201ENSMUST00000195068 502 ntBASIC12.26□□□□□ -0.45
HttP42859 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.26□□□□□ -0.45
HttP42859 AC134913.2-201ENSMUST00000225017 771 ntBASIC12.26□□□□□ -0.45
HttP42859 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
HttP42859 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.26□□□□□ -0.45
HttP42859 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HttP42859 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.26□□□□□ -0.45
HttP42859 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Gm37582-201ENSMUST00000192953 1409 ntBASIC12.26□□□□□ -0.45
HttP42859 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.26□□□□□ -0.45
HttP42859 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HttP42859 AC158777.1-201ENSMUST00000226216 1724 ntBASIC12.26□□□□□ -0.45
HttP42859 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HttP42859 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms